Cluster: HRGMv2_2225_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_4 | HRGMv2_2225_4_9 | 12127 | 13431 | + | 3.A.1.1.16 |
| TC | HRGMv2_2225_4 | HRGMv2_2225_4_10 | 13469 | 14389 | + | 3.A.1.1.23 |
| TC | HRGMv2_2225_4 | HRGMv2_2225_4_11 | 14396 | 15262 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_2225_4 | HRGMv2_2225_4_12 | 15280 | 16929 | + | GH66 |
| TF | HRGMv2_2225_4 | HRGMv2_2225_4_13 | 16942 | 17865 | + | HTH_AraC |
| CAZyme | HRGMv2_2225_4 | HRGMv2_2225_4_14 | 17889 | 19700 | + | GH125 |
Gene ID: HRGMv2_2225_4_9
Type: TC
Location: 12127 - 13431 (+)
Type: TC
Location: 12127 - 13431 (+)
Gene ID: HRGMv2_2225_4_10
Type: TC
Location: 13469 - 14389 (+)
Type: TC
Location: 13469 - 14389 (+)
Gene ID: HRGMv2_2225_4_11
Type: TC
Location: 14396 - 15262 (+)
Type: TC
Location: 14396 - 15262 (+)
Gene ID: HRGMv2_2225_4_12
Type: CAZyme
Location: 15280 - 16929 (+)
Type: CAZyme
Location: 15280 - 16929 (+)
Gene ID: HRGMv2_2225_4_13
Type: TF
Location: 16942 - 17865 (+)
Type: TF
Location: 16942 - 17865 (+)
Gene ID: HRGMv2_2225_4_14
Type: CAZyme
Location: 17889 - 19700 (+)
Type: CAZyme
Location: 17889 - 19700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.