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Cluster: HRGMv2_2225_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2225_3 HRGMv2_2225_3_31 35955 38123 - GH43_4
CAZyme HRGMv2_2225_3 HRGMv2_2225_3_32 38387 39364 - GH43_26
NULL(UNKNOWN) HRGMv2_2225_3 HRGMv2_2225_3_33 39525 41102 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2225_3 HRGMv2_2225_3_34 41143 42651 - SBP_bac_1
TC HRGMv2_2225_3 HRGMv2_2225_3_35 42721 43653 - 3.A.1.1.41
TC HRGMv2_2225_3 HRGMv2_2225_3_36 43658 44707 - 3.A.1.1.4
pfam HRGMv2_2225_3 HRGMv2_2225_3_37 44708 46903 - DUF5696
pfam HRGMv2_2225_3 HRGMv2_2225_3_38 46893 48944 - Yip1
TC HRGMv2_2225_3 HRGMv2_2225_3_39 48966 49841 - 3.A.1.1.39
TC HRGMv2_2225_3 HRGMv2_2225_3_40 49852 50760 - 3.A.1.1.4
Gene ID: HRGMv2_2225_3_31
Type: CAZyme
Location: 35955 - 38123 (-)
Gene ID: HRGMv2_2225_3_32
Type: CAZyme
Location: 38387 - 39364 (-)
Gene ID: HRGMv2_2225_3_33
Type:
Location: 39525 - 41102 (-)
Gene ID: HRGMv2_2225_3_34
Type: STP
Location: 41143 - 42651 (-)
Gene ID: HRGMv2_2225_3_35
Type: TC
Location: 42721 - 43653 (-)
Gene ID: HRGMv2_2225_3_36
Type: TC
Location: 43658 - 44707 (-)
Gene ID: HRGMv2_2225_3_37
Type: pfam
Location: 44708 - 46903 (-)
Gene ID: HRGMv2_2225_3_38
Type: pfam
Location: 46893 - 48944 (-)
Gene ID: HRGMv2_2225_3_39
Type: TC
Location: 48966 - 49841 (-)
Gene ID: HRGMv2_2225_3_40
Type: TC
Location: 49852 - 50760 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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