Cluster: HRGMv2_2225_CGC62
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_128 | HRGMv2_2225_128_1 | 3 | 1298 | - | CE17 |
| TF | HRGMv2_2225_128 | HRGMv2_2225_128_2 | 1295 | 2317 | - | LacI |
| CAZyme | HRGMv2_2225_128 | HRGMv2_2225_128_3 | 2329 | 4521 | - | GH36 |
| TC | HRGMv2_2225_128 | HRGMv2_2225_128_4 | 4723 | 5517 | - | 3.A.1.34.1 |
| TC | HRGMv2_2225_128 | HRGMv2_2225_128_5 | 5510 | 6439 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2225_128_1
Type: CAZyme
Location: 3 - 1298 (-)
Type: CAZyme
Location: 3 - 1298 (-)
Gene ID: HRGMv2_2225_128_2
Type: TF
Location: 1295 - 2317 (-)
Type: TF
Location: 1295 - 2317 (-)
Gene ID: HRGMv2_2225_128_3
Type: CAZyme
Location: 2329 - 4521 (-)
Type: CAZyme
Location: 2329 - 4521 (-)
Gene ID: HRGMv2_2225_128_4
Type: TC
Location: 4723 - 5517 (-)
Type: TC
Location: 4723 - 5517 (-)
Gene ID: HRGMv2_2225_128_5
Type: TC
Location: 5510 - 6439 (-)
Type: TC
Location: 5510 - 6439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.