Cluster: HRGMv2_2225_CGC61
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_03550
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_121 | HRGMv2_2225_121_2 | 426 | 3992 | + | GH2 |
| TC | HRGMv2_2225_121 | HRGMv2_2225_121_3 | 4087 | 5052 | + | 9.B.146.1.3 |
| pfam | HRGMv2_2225_121 | HRGMv2_2225_121_4 | 5152 | 5655 | + | GreA_GreB | GreA_GreB_N |
| peptidase | HRGMv2_2225_121 | HRGMv2_2225_121_5 | 5674 | 7176 | + | G05.UPW |
| CAZyme | HRGMv2_2225_121 | HRGMv2_2225_121_6 | 7204 | 8043 | + | GT2 |
Gene ID: HRGMv2_2225_121_2
Type: CAZyme
Location: 426 - 3992 (+)
Type: CAZyme
Location: 426 - 3992 (+)
Gene ID: HRGMv2_2225_121_3
Type: TC
Location: 4087 - 5052 (+)
Type: TC
Location: 4087 - 5052 (+)
Gene ID: HRGMv2_2225_121_4
Type: pfam
Location: 5152 - 5655 (+)
Type: pfam
Location: 5152 - 5655 (+)
Gene ID: HRGMv2_2225_121_5
Type: peptidase
Location: 5674 - 7176 (+)
Type: peptidase
Location: 5674 - 7176 (+)
Gene ID: HRGMv2_2225_121_6
Type: CAZyme
Location: 7204 - 8043 (+)
Type: CAZyme
Location: 7204 - 8043 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.