Cluster: HRGMv2_2225_CGC60
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00117
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_120 | HRGMv2_2225_120_2 | 637 | 1941 | + | 3.A.1.1.27 |
| TC | HRGMv2_2225_120 | HRGMv2_2225_120_3 | 2019 | 3419 | + | 3.A.1.1.27 |
| TC | HRGMv2_2225_120 | HRGMv2_2225_120_4 | 3419 | 4270 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_2225_120 | HRGMv2_2225_120_5 | 4388 | 6391 | + | GH13_14 |
| CAZyme | HRGMv2_2225_120 | HRGMv2_2225_120_6 | 6395 | 8077 | + | GH13_36 |
Gene ID: HRGMv2_2225_120_2
Type: TC
Location: 637 - 1941 (+)
Type: TC
Location: 637 - 1941 (+)
Gene ID: HRGMv2_2225_120_3
Type: TC
Location: 2019 - 3419 (+)
Type: TC
Location: 2019 - 3419 (+)
Gene ID: HRGMv2_2225_120_4
Type: TC
Location: 3419 - 4270 (+)
Type: TC
Location: 3419 - 4270 (+)
Gene ID: HRGMv2_2225_120_5
Type: CAZyme
Location: 4388 - 6391 (+)
Type: CAZyme
Location: 4388 - 6391 (+)
Gene ID: HRGMv2_2225_120_6
Type: CAZyme
Location: 6395 - 8077 (+)
Type: CAZyme
Location: 6395 - 8077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.