Cluster: HRGMv2_2225_CGC59
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_102 | HRGMv2_2225_102_2 | 991 | 1695 | - | 3.A.1.122.7 |
| CAZyme | HRGMv2_2225_102 | HRGMv2_2225_102_3 | 1830 | 4925 | + | GT39 |
| STP | HRGMv2_2225_102 | HRGMv2_2225_102_4 | 4932 | 5798 | - | Response_reg |
| TC | HRGMv2_2225_102 | HRGMv2_2225_102_5 | 5804 | 8662 | - | 2.A.21.9.2 |
Gene ID: HRGMv2_2225_102_2
Type: TC
Location: 991 - 1695 (-)
Type: TC
Location: 991 - 1695 (-)
Gene ID: HRGMv2_2225_102_3
Type: CAZyme
Location: 1830 - 4925 (+)
Type: CAZyme
Location: 1830 - 4925 (+)
Gene ID: HRGMv2_2225_102_4
Type: STP
Location: 4932 - 5798 (-)
Type: STP
Location: 4932 - 5798 (-)
Gene ID: HRGMv2_2225_102_5
Type: TC
Location: 5804 - 8662 (-)
Type: TC
Location: 5804 - 8662 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.