Cluster: HRGMv2_2225_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_09996
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_98 | HRGMv2_2225_98_3 | 3594 | 5171 | + | GH43_27 |
| TC | HRGMv2_2225_98 | HRGMv2_2225_98_4 | 5257 | 6243 | - | 8.A.5.1.3 |
| pfam | HRGMv2_2225_98 | HRGMv2_2225_98_5 | 6275 | 7138 | - | Abi_2 |
| STP | HRGMv2_2225_98 | HRGMv2_2225_98_6 | 7404 | 8519 | + | HhH-GPD |
| CAZyme | HRGMv2_2225_98 | HRGMv2_2225_98_7 | 8516 | 9544 | + | GT2 |
Gene ID: HRGMv2_2225_98_3
Type: CAZyme
Location: 3594 - 5171 (+)
Type: CAZyme
Location: 3594 - 5171 (+)
Gene ID: HRGMv2_2225_98_4
Type: TC
Location: 5257 - 6243 (-)
Type: TC
Location: 5257 - 6243 (-)
Gene ID: HRGMv2_2225_98_5
Type: pfam
Location: 6275 - 7138 (-)
Type: pfam
Location: 6275 - 7138 (-)
Gene ID: HRGMv2_2225_98_6
Type: STP
Location: 7404 - 8519 (+)
Type: STP
Location: 7404 - 8519 (+)
Gene ID: HRGMv2_2225_98_7
Type: CAZyme
Location: 8516 - 9544 (+)
Type: CAZyme
Location: 8516 - 9544 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.