Cluster: HRGMv2_2225_CGC54
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_07760
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_74 | HRGMv2_2225_74_1 | 3 | 791 | + | 3.A.1.2.17 |
| TC | HRGMv2_2225_74 | HRGMv2_2225_74_2 | 784 | 1878 | + | 3.A.1.2.10 |
| TC | HRGMv2_2225_74 | HRGMv2_2225_74_3 | 1880 | 2869 | + | 3.A.1.2.17 |
| pfam | HRGMv2_2225_74 | HRGMv2_2225_74_4 | 2875 | 3849 | - | DNA_pol3_delta | DNA_pol3_delta_C |
| STP | HRGMv2_2225_74 | HRGMv2_2225_74_5 | 4088 | 4606 | + | Spo0A_C |
| CAZyme | HRGMv2_2225_74 | HRGMv2_2225_74_6 | 4703 | 6148 | + | GT5 |
Gene ID: HRGMv2_2225_74_1
Type: TC
Location: 3 - 791 (+)
Type: TC
Location: 3 - 791 (+)
Gene ID: HRGMv2_2225_74_2
Type: TC
Location: 784 - 1878 (+)
Type: TC
Location: 784 - 1878 (+)
Gene ID: HRGMv2_2225_74_3
Type: TC
Location: 1880 - 2869 (+)
Type: TC
Location: 1880 - 2869 (+)
Gene ID: HRGMv2_2225_74_4
Type: pfam
Location: 2875 - 3849 (-)
Type: pfam
Location: 2875 - 3849 (-)
Gene ID: HRGMv2_2225_74_5
Type: STP
Location: 4088 - 4606 (+)
Type: STP
Location: 4088 - 4606 (+)
Gene ID: HRGMv2_2225_74_6
Type: CAZyme
Location: 4703 - 6148 (+)
Type: CAZyme
Location: 4703 - 6148 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.