Cluster: HRGMv2_2225_CGC53
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00345
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_73 | HRGMv2_2225_73_6 | 6925 | 10305 | + | CBM91 | GH43_10 |
| STP | HRGMv2_2225_73 | HRGMv2_2225_73_7 | 10537 | 13491 | + | SBP_bac_1 |
| TC | HRGMv2_2225_73 | HRGMv2_2225_73_8 | 13503 | 14441 | + | 3.A.1.1.11 |
| TC | HRGMv2_2225_73 | HRGMv2_2225_73_9 | 14443 | 15345 | + | 3.A.1.1.18 |
Gene ID: HRGMv2_2225_73_6
Type: CAZyme
Location: 6925 - 10305 (+)
Type: CAZyme
Location: 6925 - 10305 (+)
Gene ID: HRGMv2_2225_73_7
Type: STP
Location: 10537 - 13491 (+)
Type: STP
Location: 10537 - 13491 (+)
Gene ID: HRGMv2_2225_73_8
Type: TC
Location: 13503 - 14441 (+)
Type: TC
Location: 13503 - 14441 (+)
Gene ID: HRGMv2_2225_73_9
Type: TC
Location: 14443 - 15345 (+)
Type: TC
Location: 14443 - 15345 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.