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Cluster: HRGMv2_2225_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2225_64 HRGMv2_2225_64_11 9708 11138 + 2.A.25.1.3
peptidase HRGMv2_2225_64 HRGMv2_2225_64_12 11225 12472 + M20.003
pfam HRGMv2_2225_64 HRGMv2_2225_64_13 12518 13990 + UPF0004 | TRAM | Radical_SAM
TC HRGMv2_2225_64 HRGMv2_2225_64_14 14024 15547 + 2.A.2.2.1
CAZyme HRGMv2_2225_64 HRGMv2_2225_64_15 15791 17650 + GH13_31
pfam HRGMv2_2225_64 HRGMv2_2225_64_16 17647 19338 + Metallophos | tRNA_edit
TC HRGMv2_2225_64 HRGMv2_2225_64_17 19476 21122 + 2.A.53.3.9
Gene ID: HRGMv2_2225_64_11
Type: TC
Location: 9708 - 11138 (+)
Gene ID: HRGMv2_2225_64_12
Type: peptidase
Location: 11225 - 12472 (+)
Gene ID: HRGMv2_2225_64_13
Type: pfam
Location: 12518 - 13990 (+)
Gene ID: HRGMv2_2225_64_14
Type: TC
Location: 14024 - 15547 (+)
Gene ID: HRGMv2_2225_64_15
Type: CAZyme
Location: 15791 - 17650 (+)
Gene ID: HRGMv2_2225_64_16
Type: pfam
Location: 17647 - 19338 (+)
Gene ID: HRGMv2_2225_64_17
Type: TC
Location: 19476 - 21122 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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