Cluster: HRGMv2_2225_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_2 | HRGMv2_2225_2_65 | 80997 | 81833 | - | 3.A.1.1.27 |
| TC | HRGMv2_2225_2 | HRGMv2_2225_2_66 | 81830 | 83083 | - | 3.A.1.1.27 |
| STP | HRGMv2_2225_2 | HRGMv2_2225_2_67 | 83171 | 84673 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2225_2 | HRGMv2_2225_2_68 | 84720 | 86417 | - | CBM34 | GH13_20 |
Gene ID: HRGMv2_2225_2_65
Type: TC
Location: 80997 - 81833 (-)
Type: TC
Location: 80997 - 81833 (-)
Gene ID: HRGMv2_2225_2_66
Type: TC
Location: 81830 - 83083 (-)
Type: TC
Location: 81830 - 83083 (-)
Gene ID: HRGMv2_2225_2_67
Type: STP
Location: 83171 - 84673 (-)
Type: STP
Location: 83171 - 84673 (-)
Gene ID: HRGMv2_2225_2_68
Type: CAZyme
Location: 84720 - 86417 (-)
Type: CAZyme
Location: 84720 - 86417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.