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Cluster: HRGMv2_2225_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2225_53 HRGMv2_2225_53_5 6096 7592 - GT4
TC HRGMv2_2225_53 HRGMv2_2225_53_6 7605 9944 - 3.A.5.10.1
TC HRGMv2_2225_53 HRGMv2_2225_53_7 10411 11913 - 3.A.5.10.1
TC HRGMv2_2225_53 HRGMv2_2225_53_8 11906 13507 - 3.A.5.10.1
TC HRGMv2_2225_53 HRGMv2_2225_53_9 13521 14723 - 3.A.5.3.1
NULL(UNKNOWN) HRGMv2_2225_53 HRGMv2_2225_53_10 15232 16392 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2225_53 HRGMv2_2225_53_11 17858 19054 - BTAD
CAZyme HRGMv2_2225_53 HRGMv2_2225_53_12 19083 20000 - GT113 | GT113
CAZyme HRGMv2_2225_53 HRGMv2_2225_53_13 20005 21033 - GT113
CAZyme HRGMv2_2225_53 HRGMv2_2225_53_14 21253 22239 + GT2
Gene ID: HRGMv2_2225_53_5
Type: CAZyme
Location: 6096 - 7592 (-)
Gene ID: HRGMv2_2225_53_6
Type: TC
Location: 7605 - 9944 (-)
Gene ID: HRGMv2_2225_53_7
Type: TC
Location: 10411 - 11913 (-)
Gene ID: HRGMv2_2225_53_8
Type: TC
Location: 11906 - 13507 (-)
Gene ID: HRGMv2_2225_53_9
Type: TC
Location: 13521 - 14723 (-)
Gene ID: HRGMv2_2225_53_10
Type:
Location: 15232 - 16392 (+)
Gene ID: HRGMv2_2225_53_11
Type: STP
Location: 17858 - 19054 (-)
Gene ID: HRGMv2_2225_53_12
Type: CAZyme
Location: 19083 - 20000 (-)
Gene ID: HRGMv2_2225_53_13
Type: CAZyme
Location: 20005 - 21033 (-)
Gene ID: HRGMv2_2225_53_14
Type: CAZyme
Location: 21253 - 22239 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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