Cluster: HRGMv2_2225_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_02144
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_51 | HRGMv2_2225_51_16 | 19201 | 20994 | - | GH27 |
| pfam | HRGMv2_2225_51 | HRGMv2_2225_51_17 | 21146 | 21931 | - | ABC2_membrane_6 |
| pfam | HRGMv2_2225_51 | HRGMv2_2225_51_18 | 21951 | 22754 | - | ABC2_membrane_6 |
| TC | HRGMv2_2225_51 | HRGMv2_2225_51_19 | 22765 | 23553 | - | 3.A.1.141.2 |
Gene ID: HRGMv2_2225_51_16
Type: CAZyme
Location: 19201 - 20994 (-)
Type: CAZyme
Location: 19201 - 20994 (-)
Gene ID: HRGMv2_2225_51_17
Type: pfam
Location: 21146 - 21931 (-)
Type: pfam
Location: 21146 - 21931 (-)
Gene ID: HRGMv2_2225_51_18
Type: pfam
Location: 21951 - 22754 (-)
Type: pfam
Location: 21951 - 22754 (-)
Gene ID: HRGMv2_2225_51_19
Type: TC
Location: 22765 - 23553 (-)
Type: TC
Location: 22765 - 23553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.