Cluster: HRGMv2_2225_CGC44
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_47 | HRGMv2_2225_47_21 | 15172 | 16074 | + | 2.A.21.9.2 |
| TC | HRGMv2_2225_47 | HRGMv2_2225_47_22 | 16195 | 16866 | + | 3.A.1.125.3 |
| pfam | HRGMv2_2225_47 | HRGMv2_2225_47_23 | 16876 | 19521 | + | FtsX | FtsX |
| TF | HRGMv2_2225_47 | HRGMv2_2225_47_24 | 19735 | 20595 | - | HTH_AraC |
| CAZyme | HRGMv2_2225_47 | HRGMv2_2225_47_25 | 20767 | 22611 | + | GH146 |
Gene ID: HRGMv2_2225_47_21
Type: TC
Location: 15172 - 16074 (+)
Type: TC
Location: 15172 - 16074 (+)
Gene ID: HRGMv2_2225_47_22
Type: TC
Location: 16195 - 16866 (+)
Type: TC
Location: 16195 - 16866 (+)
Gene ID: HRGMv2_2225_47_23
Type: pfam
Location: 16876 - 19521 (+)
Type: pfam
Location: 16876 - 19521 (+)
Gene ID: HRGMv2_2225_47_24
Type: TF
Location: 19735 - 20595 (-)
Type: TF
Location: 19735 - 20595 (-)
Gene ID: HRGMv2_2225_47_25
Type: CAZyme
Location: 20767 - 22611 (+)
Type: CAZyme
Location: 20767 - 22611 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.