dbCAN Logo

Cluster: HRGMv2_2225_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2225_44 HRGMv2_2225_44_2 890 2614 - 9.B.34.1.2
pfam HRGMv2_2225_44 HRGMv2_2225_44_3 2643 3728 - Semialdhyde_dh | Semialdhyde_dhC
pfam HRGMv2_2225_44 HRGMv2_2225_44_4 3816 5321 - Lyase_1 | ASL_C2
TC HRGMv2_2225_44 HRGMv2_2225_44_5 5387 6166 + 3.A.1.17.8
TC HRGMv2_2225_44 HRGMv2_2225_44_6 6144 6959 + 3.A.1.17.3
TC HRGMv2_2225_44 HRGMv2_2225_44_7 7257 8156 - 1.A.23.2.1
CAZyme HRGMv2_2225_44 HRGMv2_2225_44_8 8153 10387 - CBM48 | GH13_9
Gene ID: HRGMv2_2225_44_2
Type: TC
Location: 890 - 2614 (-)
Gene ID: HRGMv2_2225_44_3
Type: pfam
Location: 2643 - 3728 (-)
Gene ID: HRGMv2_2225_44_4
Type: pfam
Location: 3816 - 5321 (-)
Gene ID: HRGMv2_2225_44_5
Type: TC
Location: 5387 - 6166 (+)
Gene ID: HRGMv2_2225_44_6
Type: TC
Location: 6144 - 6959 (+)
Gene ID: HRGMv2_2225_44_7
Type: TC
Location: 7257 - 8156 (-)
Gene ID: HRGMv2_2225_44_8
Type: CAZyme
Location: 8153 - 10387 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List