Cluster: HRGMv2_2225_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_02460
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_40 | HRGMv2_2225_40_2 | 1053 | 2774 | - | 8.A.7.1.1 |
| STP | HRGMv2_2225_40 | HRGMv2_2225_40_3 | 2791 | 3057 | - | PTS-HPr |
| CAZyme | HRGMv2_2225_40 | HRGMv2_2225_40_4 | 3099 | 4574 | - | GH1 |
| TC | HRGMv2_2225_40 | HRGMv2_2225_40_5 | 4574 | 5863 | - | 4.A.3.2.2 |
| TC | HRGMv2_2225_40 | HRGMv2_2225_40_6 | 5884 | 6189 | - | 4.A.3.2.6 |
| TC | HRGMv2_2225_40 | HRGMv2_2225_40_7 | 6205 | 6528 | - | 4.A.3.2.1 |
Gene ID: HRGMv2_2225_40_2
Type: TC
Location: 1053 - 2774 (-)
Type: TC
Location: 1053 - 2774 (-)
Gene ID: HRGMv2_2225_40_3
Type: STP
Location: 2791 - 3057 (-)
Type: STP
Location: 2791 - 3057 (-)
Gene ID: HRGMv2_2225_40_4
Type: CAZyme
Location: 3099 - 4574 (-)
Type: CAZyme
Location: 3099 - 4574 (-)
Gene ID: HRGMv2_2225_40_5
Type: TC
Location: 4574 - 5863 (-)
Type: TC
Location: 4574 - 5863 (-)
Gene ID: HRGMv2_2225_40_6
Type: TC
Location: 5884 - 6189 (-)
Type: TC
Location: 5884 - 6189 (-)
Gene ID: HRGMv2_2225_40_7
Type: TC
Location: 6205 - 6528 (-)
Type: TC
Location: 6205 - 6528 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.