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Cluster: HRGMv2_2225_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2225_39 HRGMv2_2225_39_14 15355 17712 - CE1 | GH10
TC HRGMv2_2225_39 HRGMv2_2225_39_15 17941 19494 + 3.A.1.5.11
TC HRGMv2_2225_39 HRGMv2_2225_39_16 19524 20483 + 3.A.1.5.20
TC HRGMv2_2225_39 HRGMv2_2225_39_17 20503 21312 + 3.A.1.5.20
TC HRGMv2_2225_39 HRGMv2_2225_39_18 21357 22916 + 3.A.1.5.21
TC HRGMv2_2225_39 HRGMv2_2225_39_19 23016 25679 + 3.A.3.2.21
CAZyme HRGMv2_2225_39 HRGMv2_2225_39_20 25648 28059 - GH2
Gene ID: HRGMv2_2225_39_14
Type: CAZyme
Location: 15355 - 17712 (-)
Gene ID: HRGMv2_2225_39_15
Type: TC
Location: 17941 - 19494 (+)
Gene ID: HRGMv2_2225_39_16
Type: TC
Location: 19524 - 20483 (+)
Gene ID: HRGMv2_2225_39_17
Type: TC
Location: 20503 - 21312 (+)
Gene ID: HRGMv2_2225_39_18
Type: TC
Location: 21357 - 22916 (+)
Gene ID: HRGMv2_2225_39_19
Type: TC
Location: 23016 - 25679 (+)
Gene ID: HRGMv2_2225_39_20
Type: CAZyme
Location: 25648 - 28059 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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