Cluster: HRGMv2_2225_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_2 | HRGMv2_2225_2_12 | 10604 | 12316 | - | CBM34 | GH13_20 |
| TC | HRGMv2_2225_2 | HRGMv2_2225_2_13 | 12313 | 13152 | - | 3.A.1.1.6 |
| TC | HRGMv2_2225_2 | HRGMv2_2225_2_14 | 13163 | 14056 | - | 3.A.1.1.44 |
| TC | HRGMv2_2225_2 | HRGMv2_2225_2_15 | 14070 | 15284 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_2225_2_12
Type: CAZyme
Location: 10604 - 12316 (-)
Type: CAZyme
Location: 10604 - 12316 (-)
Gene ID: HRGMv2_2225_2_13
Type: TC
Location: 12313 - 13152 (-)
Type: TC
Location: 12313 - 13152 (-)
Gene ID: HRGMv2_2225_2_14
Type: TC
Location: 13163 - 14056 (-)
Type: TC
Location: 13163 - 14056 (-)
Gene ID: HRGMv2_2225_2_15
Type: TC
Location: 14070 - 15284 (-)
Type: TC
Location: 14070 - 15284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.