Cluster: HRGMv2_2225_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_07763
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_23 | HRGMv2_2225_23_13 | 21241 | 22671 | + | GH10 |
| CAZyme | HRGMv2_2225_23 | HRGMv2_2225_23_14 | 22682 | 24283 | + | CBM91 | GH43_12 |
| CAZyme | HRGMv2_2225_23 | HRGMv2_2225_23_15 | 24356 | 25951 | - | GH9 |
| pfam | HRGMv2_2225_23 | HRGMv2_2225_23_16 | 25999 | 27156 | - | DUF4317 |
| TC | HRGMv2_2225_23 | HRGMv2_2225_23_17 | 27340 | 27792 | + | 1.A.22.1.4 |
Gene ID: HRGMv2_2225_23_13
Type: CAZyme
Location: 21241 - 22671 (+)
Type: CAZyme
Location: 21241 - 22671 (+)
Gene ID: HRGMv2_2225_23_14
Type: CAZyme
Location: 22682 - 24283 (+)
Type: CAZyme
Location: 22682 - 24283 (+)
Gene ID: HRGMv2_2225_23_15
Type: CAZyme
Location: 24356 - 25951 (-)
Type: CAZyme
Location: 24356 - 25951 (-)
Gene ID: HRGMv2_2225_23_16
Type: pfam
Location: 25999 - 27156 (-)
Type: pfam
Location: 25999 - 27156 (-)
Gene ID: HRGMv2_2225_23_17
Type: TC
Location: 27340 - 27792 (+)
Type: TC
Location: 27340 - 27792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.