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Cluster: HRGMv2_2225_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2225_21 HRGMv2_2225_21_4 2015 3529 + 3.A.1.121.4
pfam HRGMv2_2225_21 HRGMv2_2225_21_5 3883 5367 - DUF3502
TC HRGMv2_2225_21 HRGMv2_2225_21_6 5439 6380 - 3.A.1.1.29
TC HRGMv2_2225_21 HRGMv2_2225_21_7 6397 7302 - 3.A.1.1.10
TF HRGMv2_2225_21 HRGMv2_2225_21_8 7355 8389 - LacI
CAZyme HRGMv2_2225_21 HRGMv2_2225_21_9 8789 11224 + GH94
pfam HRGMv2_2225_21 HRGMv2_2225_21_10 11722 12711 + 2-Hacid_dh | 2-Hacid_dh_C
TC HRGMv2_2225_21 HRGMv2_2225_21_11 12718 14118 - 2.A.66.1.28
pfam HRGMv2_2225_21 HRGMv2_2225_21_12 14208 14903 - Radical_SAM | Fer4_12
CAZyme HRGMv2_2225_21 HRGMv2_2225_21_13 14907 16445 - GH77
CAZyme HRGMv2_2225_21 HRGMv2_2225_21_14 16465 19200 - GH13_14
CAZyme HRGMv2_2225_21 HRGMv2_2225_21_15 19437 21710 - GT35
Gene ID: HRGMv2_2225_21_4
Type: TC
Location: 2015 - 3529 (+)
Gene ID: HRGMv2_2225_21_5
Type: pfam
Location: 3883 - 5367 (-)
Gene ID: HRGMv2_2225_21_6
Type: TC
Location: 5439 - 6380 (-)
Gene ID: HRGMv2_2225_21_7
Type: TC
Location: 6397 - 7302 (-)
Gene ID: HRGMv2_2225_21_8
Type: TF
Location: 7355 - 8389 (-)
Gene ID: HRGMv2_2225_21_9
Type: CAZyme
Location: 8789 - 11224 (+)
Gene ID: HRGMv2_2225_21_10
Type: pfam
Location: 11722 - 12711 (+)
Gene ID: HRGMv2_2225_21_11
Type: TC
Location: 12718 - 14118 (-)
Gene ID: HRGMv2_2225_21_12
Type: pfam
Location: 14208 - 14903 (-)
Gene ID: HRGMv2_2225_21_13
Type: CAZyme
Location: 14907 - 16445 (-)
Gene ID: HRGMv2_2225_21_14
Type: CAZyme
Location: 16465 - 19200 (-)
Gene ID: HRGMv2_2225_21_15
Type: CAZyme
Location: 19437 - 21710 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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