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Cluster: HRGMv2_2225_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2225_20 HRGMv2_2225_20_15 12027 13157 - GH27
peptidase HRGMv2_2225_20 HRGMv2_2225_20_16 13506 14948 - M20.UPW
peptidase HRGMv2_2225_20 HRGMv2_2225_20_17 14950 16467 - M81.UPW
TC HRGMv2_2225_20 HRGMv2_2225_20_18 16483 17466 - 3.A.1.5.20
TC HRGMv2_2225_20 HRGMv2_2225_20_19 17474 18490 - 3.A.1.5.35
TC HRGMv2_2225_20 HRGMv2_2225_20_20 18532 19404 - 3.A.1.5.11
TC HRGMv2_2225_20 HRGMv2_2225_20_21 19418 20365 - 3.A.1.5.11
pfam HRGMv2_2225_20 HRGMv2_2225_20_22 20381 20722 - P-II
pfam HRGMv2_2225_20 HRGMv2_2225_20_23 20752 21591 - CN_hydrolase
TC HRGMv2_2225_20 HRGMv2_2225_20_24 21674 23314 - 3.A.1.5.4
TF HRGMv2_2225_20 HRGMv2_2225_20_25 23398 24240 - HTH_6
pfam HRGMv2_2225_20 HRGMv2_2225_20_26 24451 25761 + Aminotran_3
CAZyme HRGMv2_2225_20 HRGMv2_2225_20_27 25739 27511 - CBM2 | GH5_2
Gene ID: HRGMv2_2225_20_15
Type: CAZyme
Location: 12027 - 13157 (-)
Gene ID: HRGMv2_2225_20_16
Type: peptidase
Location: 13506 - 14948 (-)
Gene ID: HRGMv2_2225_20_17
Type: peptidase
Location: 14950 - 16467 (-)
Gene ID: HRGMv2_2225_20_18
Type: TC
Location: 16483 - 17466 (-)
Gene ID: HRGMv2_2225_20_19
Type: TC
Location: 17474 - 18490 (-)
Gene ID: HRGMv2_2225_20_20
Type: TC
Location: 18532 - 19404 (-)
Gene ID: HRGMv2_2225_20_21
Type: TC
Location: 19418 - 20365 (-)
Gene ID: HRGMv2_2225_20_22
Type: pfam
Location: 20381 - 20722 (-)
Gene ID: HRGMv2_2225_20_23
Type: pfam
Location: 20752 - 21591 (-)
Gene ID: HRGMv2_2225_20_24
Type: TC
Location: 21674 - 23314 (-)
Gene ID: HRGMv2_2225_20_25
Type: TF
Location: 23398 - 24240 (-)
Gene ID: HRGMv2_2225_20_26
Type: pfam
Location: 24451 - 25761 (+)
Gene ID: HRGMv2_2225_20_27
Type: CAZyme
Location: 25739 - 27511 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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