dbCAN Logo

Cluster: HRGMv2_2225_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2225_19 HRGMv2_2225_19_24 21879 23624 - GH35
CAZyme HRGMv2_2225_19 HRGMv2_2225_19_25 23672 25228 - GH30_4
TC HRGMv2_2225_19 HRGMv2_2225_19_26 25228 26214 - 3.A.1.1.20
TC HRGMv2_2225_19 HRGMv2_2225_19_27 26204 27112 - 3.A.1.1.10
pfam HRGMv2_2225_19 HRGMv2_2225_19_28 27109 29724 - DUF5696
pfam HRGMv2_2225_19 HRGMv2_2225_19_29 29735 31849 - Yip1
TC HRGMv2_2225_19 HRGMv2_2225_19_30 31860 32747 - 3.A.1.1.39
TC HRGMv2_2225_19 HRGMv2_2225_19_31 32760 33665 - 3.A.1.1.23
Gene ID: HRGMv2_2225_19_24
Type: CAZyme
Location: 21879 - 23624 (-)
Gene ID: HRGMv2_2225_19_25
Type: CAZyme
Location: 23672 - 25228 (-)
Gene ID: HRGMv2_2225_19_26
Type: TC
Location: 25228 - 26214 (-)
Gene ID: HRGMv2_2225_19_27
Type: TC
Location: 26204 - 27112 (-)
Gene ID: HRGMv2_2225_19_28
Type: pfam
Location: 27109 - 29724 (-)
Gene ID: HRGMv2_2225_19_29
Type: pfam
Location: 29735 - 31849 (-)
Gene ID: HRGMv2_2225_19_30
Type: TC
Location: 31860 - 32747 (-)
Gene ID: HRGMv2_2225_19_31
Type: TC
Location: 32760 - 33665 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List