Cluster: HRGMv2_2225_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00801
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_15 | HRGMv2_2225_15_1 | 81 | 2678 | + | 3.A.9.1.2 |
| pfam | HRGMv2_2225_15 | HRGMv2_2225_15_2 | 2675 | 2848 | + | DUF4250 |
| pfam | HRGMv2_2225_15 | HRGMv2_2225_15_3 | 2866 | 4083 | + | RACo_C_ter | RACo_C_ter | Raco_middle |
| CAZyme | HRGMv2_2225_15 | HRGMv2_2225_15_4 | 4173 | 4874 | + | CE4 |
Gene ID: HRGMv2_2225_15_1
Type: TC
Location: 81 - 2678 (+)
Type: TC
Location: 81 - 2678 (+)
Gene ID: HRGMv2_2225_15_2
Type: pfam
Location: 2675 - 2848 (+)
Type: pfam
Location: 2675 - 2848 (+)
Gene ID: HRGMv2_2225_15_3
Type: pfam
Location: 2866 - 4083 (+)
Type: pfam
Location: 2866 - 4083 (+)
Gene ID: HRGMv2_2225_15_4
Type: CAZyme
Location: 4173 - 4874 (+)
Type: CAZyme
Location: 4173 - 4874 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.