Cluster: HRGMv2_2225_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_09993
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_14 | HRGMv2_2225_14_10 | 9872 | 11245 | + | 3.A.1.1.27 |
| TC | HRGMv2_2225_14 | HRGMv2_2225_14_11 | 11242 | 12105 | + | 3.A.1.1.27 |
| TC | HRGMv2_2225_14 | HRGMv2_2225_14_12 | 12472 | 13854 | + | 2.A.66.1.9 |
| CAZyme | HRGMv2_2225_14 | HRGMv2_2225_14_13 | 13866 | 14948 | + | CE2 |
Gene ID: HRGMv2_2225_14_10
Type: TC
Location: 9872 - 11245 (+)
Type: TC
Location: 9872 - 11245 (+)
Gene ID: HRGMv2_2225_14_11
Type: TC
Location: 11242 - 12105 (+)
Type: TC
Location: 11242 - 12105 (+)
Gene ID: HRGMv2_2225_14_12
Type: TC
Location: 12472 - 13854 (+)
Type: TC
Location: 12472 - 13854 (+)
Gene ID: HRGMv2_2225_14_13
Type: CAZyme
Location: 13866 - 14948 (+)
Type: CAZyme
Location: 13866 - 14948 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.