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Cluster: HRGMv2_2225_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2225_11 HRGMv2_2225_11_27 33997 34626 - 9.A.11.1.1
TC HRGMv2_2225_11 HRGMv2_2225_11_28 34663 35145 - 9.A.11.1.1
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_29 35389 36927 + GH13_44
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_30 36932 38920 - GH31_1
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_31 38939 41317 - GH31_15
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_32 41319 43334 - GH31_7
TC HRGMv2_2225_11 HRGMv2_2225_11_33 43390 45021 - 3.A.1.1.10
TC HRGMv2_2225_11 HRGMv2_2225_11_34 45057 45923 - 3.A.1.1.10
TC HRGMv2_2225_11 HRGMv2_2225_11_35 45943 46866 - 3.A.1.1.10
Gene ID: HRGMv2_2225_11_27
Type: TC
Location: 33997 - 34626 (-)
Gene ID: HRGMv2_2225_11_28
Type: TC
Location: 34663 - 35145 (-)
Gene ID: HRGMv2_2225_11_29
Type: CAZyme
Location: 35389 - 36927 (+)
Gene ID: HRGMv2_2225_11_30
Type: CAZyme
Location: 36932 - 38920 (-)
Gene ID: HRGMv2_2225_11_31
Type: CAZyme
Location: 38939 - 41317 (-)
Gene ID: HRGMv2_2225_11_32
Type: CAZyme
Location: 41319 - 43334 (-)
Gene ID: HRGMv2_2225_11_33
Type: TC
Location: 43390 - 45021 (-)
Gene ID: HRGMv2_2225_11_34
Type: TC
Location: 45057 - 45923 (-)
Gene ID: HRGMv2_2225_11_35
Type: TC
Location: 45943 - 46866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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