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Cluster: HRGMv2_2225_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2225_11 HRGMv2_2225_11_5 3950 4438 - 9.A.11.1.1
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_6 4547 5881 - GH30_1
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_7 5909 6658 - GH16_3
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_8 7028 9718 - GH94
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_9 9773 12961 - GH161
CAZyme HRGMv2_2225_11 HRGMv2_2225_11_10 12999 14036 - GH16_3
TC HRGMv2_2225_11 HRGMv2_2225_11_11 14040 14969 - 3.A.1.1.36
TC HRGMv2_2225_11 HRGMv2_2225_11_12 14963 15868 - 3.A.1.1.48
Gene ID: HRGMv2_2225_11_5
Type: TC
Location: 3950 - 4438 (-)
Gene ID: HRGMv2_2225_11_6
Type: CAZyme
Location: 4547 - 5881 (-)
Gene ID: HRGMv2_2225_11_7
Type: CAZyme
Location: 5909 - 6658 (-)
Gene ID: HRGMv2_2225_11_8
Type: CAZyme
Location: 7028 - 9718 (-)
Gene ID: HRGMv2_2225_11_9
Type: CAZyme
Location: 9773 - 12961 (-)
Gene ID: HRGMv2_2225_11_10
Type: CAZyme
Location: 12999 - 14036 (-)
Gene ID: HRGMv2_2225_11_11
Type: TC
Location: 14040 - 14969 (-)
Gene ID: HRGMv2_2225_11_12
Type: TC
Location: 14963 - 15868 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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