Cluster: HRGMv2_2225_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00045
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_10 | HRGMv2_2225_10_21 | 22448 | 23773 | - | 2.A.66.1.26 |
| CAZyme | HRGMv2_2225_10 | HRGMv2_2225_10_22 | 24075 | 25850 | - | CBM34 | GH13_20 |
| TC | HRGMv2_2225_10 | HRGMv2_2225_10_23 | 25876 | 26724 | - | 3.A.1.1.2 |
| TC | HRGMv2_2225_10 | HRGMv2_2225_10_24 | 26737 | 27618 | - | 3.A.1.1.2 |
| TC | HRGMv2_2225_10 | HRGMv2_2225_10_25 | 27663 | 28958 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_2225_10_21
Type: TC
Location: 22448 - 23773 (-)
Type: TC
Location: 22448 - 23773 (-)
Gene ID: HRGMv2_2225_10_22
Type: CAZyme
Location: 24075 - 25850 (-)
Type: CAZyme
Location: 24075 - 25850 (-)
Gene ID: HRGMv2_2225_10_23
Type: TC
Location: 25876 - 26724 (-)
Type: TC
Location: 25876 - 26724 (-)
Gene ID: HRGMv2_2225_10_24
Type: TC
Location: 26737 - 27618 (-)
Type: TC
Location: 26737 - 27618 (-)
Gene ID: HRGMv2_2225_10_25
Type: TC
Location: 27663 - 28958 (-)
Type: TC
Location: 27663 - 28958 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.