Cluster: HRGMv2_2225_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00096
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2225_9 | HRGMv2_2225_9_8 | 7589 | 9463 | - | 9.B.18.2.1 |
| NULL(UNKNOWN) | HRGMv2_2225_9 | HRGMv2_2225_9_9 | 9649 | 10764 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2225_9 | HRGMv2_2225_9_10 | 10773 | 12974 | - | GH73 |
| CAZyme | HRGMv2_2225_9 | HRGMv2_2225_9_11 | 13070 | 14053 | - | GT2 |
| CAZyme | HRGMv2_2225_9 | HRGMv2_2225_9_12 | 14046 | 15275 | - | GT4 |
| CAZyme | HRGMv2_2225_9 | HRGMv2_2225_9_13 | 15272 | 16630 | - | GT4 |
Gene ID: HRGMv2_2225_9_8
Type: TC
Location: 7589 - 9463 (-)
Type: TC
Location: 7589 - 9463 (-)
Gene ID: HRGMv2_2225_9_9
Type:
Location: 9649 - 10764 (-)
Type:
Location: 9649 - 10764 (-)
Gene ID: HRGMv2_2225_9_10
Type: CAZyme
Location: 10773 - 12974 (-)
Type: CAZyme
Location: 10773 - 12974 (-)
Gene ID: HRGMv2_2225_9_11
Type: CAZyme
Location: 13070 - 14053 (-)
Type: CAZyme
Location: 13070 - 14053 (-)
Gene ID: HRGMv2_2225_9_12
Type: CAZyme
Location: 14046 - 15275 (-)
Type: CAZyme
Location: 14046 - 15275 (-)
Gene ID: HRGMv2_2225_9_13
Type: CAZyme
Location: 15272 - 16630 (-)
Type: CAZyme
Location: 15272 - 16630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.