Cluster: HRGMv2_2225_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_02571
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_1 | HRGMv2_2225_1_54 | 54464 | 56950 | - | GH2 |
| CAZyme | HRGMv2_2225_1 | HRGMv2_2225_1_55 | 56994 | 59417 | - | GH95 |
| pfam | HRGMv2_2225_1 | HRGMv2_2225_1_56 | 59632 | 60495 | - | F_bP_aldolase |
| pfam | HRGMv2_2225_1 | HRGMv2_2225_1_57 | 60582 | 61472 | - | DAGK_cat | YegS_C |
| TC | HRGMv2_2225_1 | HRGMv2_2225_1_58 | 61571 | 61831 | - | 8.A.8.1.6 |
Gene ID: HRGMv2_2225_1_54
Type: CAZyme
Location: 54464 - 56950 (-)
Type: CAZyme
Location: 54464 - 56950 (-)
Gene ID: HRGMv2_2225_1_55
Type: CAZyme
Location: 56994 - 59417 (-)
Type: CAZyme
Location: 56994 - 59417 (-)
Gene ID: HRGMv2_2225_1_56
Type: pfam
Location: 59632 - 60495 (-)
Type: pfam
Location: 59632 - 60495 (-)
Gene ID: HRGMv2_2225_1_57
Type: pfam
Location: 60582 - 61472 (-)
Type: pfam
Location: 60582 - 61472 (-)
Gene ID: HRGMv2_2225_1_58
Type: TC
Location: 61571 - 61831 (-)
Type: TC
Location: 61571 - 61831 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.