Cluster: HRGMv2_2225_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00003
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_9 | HRGMv2_2225_9_2 | 723 | 2465 | - | GT4 | GT4 |
| pfam | HRGMv2_2225_9 | HRGMv2_2225_9_3 | 2478 | 3362 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | HRGMv2_2225_9 | HRGMv2_2225_9_4 | 3359 | 4000 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_2225_9_2
Type: CAZyme
Location: 723 - 2465 (-)
Type: CAZyme
Location: 723 - 2465 (-)
Gene ID: HRGMv2_2225_9_3
Type: pfam
Location: 2478 - 3362 (-)
Type: pfam
Location: 2478 - 3362 (-)
Gene ID: HRGMv2_2225_9_4
Type: TC
Location: 3359 - 4000 (-)
Type: TC
Location: 3359 - 4000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.