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Cluster: HRGMv2_2225_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2225_7 HRGMv2_2225_7_15 16564 18102 - 2.A.66.1.40
pfam HRGMv2_2225_7 HRGMv2_2225_7_16 18117 19124 - Stealth_CR2 | Stealth_CR1
pfam HRGMv2_2225_7 HRGMv2_2225_7_17 19112 20353 - DUF4832 | DUF4874
CAZyme HRGMv2_2225_7 HRGMv2_2225_7_18 20328 21125 - GT2
CAZyme HRGMv2_2225_7 HRGMv2_2225_7_19 21116 22318 - GT4
pfam HRGMv2_2225_7 HRGMv2_2225_7_20 22293 22664 - DUF2304
pfam HRGMv2_2225_7 HRGMv2_2225_7_21 22679 24127 - PelG
CAZyme HRGMv2_2225_7 HRGMv2_2225_7_22 24157 25581 - GT4
Gene ID: HRGMv2_2225_7_15
Type: TC
Location: 16564 - 18102 (-)
Gene ID: HRGMv2_2225_7_16
Type: pfam
Location: 18117 - 19124 (-)
Gene ID: HRGMv2_2225_7_17
Type: pfam
Location: 19112 - 20353 (-)
Gene ID: HRGMv2_2225_7_18
Type: CAZyme
Location: 20328 - 21125 (-)
Gene ID: HRGMv2_2225_7_19
Type: CAZyme
Location: 21116 - 22318 (-)
Gene ID: HRGMv2_2225_7_20
Type: pfam
Location: 22293 - 22664 (-)
Gene ID: HRGMv2_2225_7_21
Type: pfam
Location: 22679 - 24127 (-)
Gene ID: HRGMv2_2225_7_22
Type: CAZyme
Location: 24157 - 25581 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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