Cluster: HRGMv2_2225_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_00196
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_6 | HRGMv2_2225_6_41 | 41836 | 42858 | - | CE4 |
| TC | HRGMv2_2225_6 | HRGMv2_2225_6_42 | 42993 | 44930 | - | 3.A.1.135.5 |
| TC | HRGMv2_2225_6 | HRGMv2_2225_6_43 | 44933 | 46681 | - | 3.A.1.135.5 |
| TF | HRGMv2_2225_6 | HRGMv2_2225_6_44 | 46675 | 47196 | - | MarR |
| CAZyme | HRGMv2_2225_6 | HRGMv2_2225_6_45 | 47299 | 48459 | - | GH25 |
Gene ID: HRGMv2_2225_6_41
Type: CAZyme
Location: 41836 - 42858 (-)
Type: CAZyme
Location: 41836 - 42858 (-)
Gene ID: HRGMv2_2225_6_42
Type: TC
Location: 42993 - 44930 (-)
Type: TC
Location: 42993 - 44930 (-)
Gene ID: HRGMv2_2225_6_43
Type: TC
Location: 44933 - 46681 (-)
Type: TC
Location: 44933 - 46681 (-)
Gene ID: HRGMv2_2225_6_44
Type: TF
Location: 46675 - 47196 (-)
Type: TF
Location: 46675 - 47196 (-)
Gene ID: HRGMv2_2225_6_45
Type: CAZyme
Location: 47299 - 48459 (-)
Type: CAZyme
Location: 47299 - 48459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.