Cluster: HRGMv2_2225_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_02896
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_6 | HRGMv2_2225_6_18 | 18730 | 19869 | - | GH105 |
| TC | HRGMv2_2225_6 | HRGMv2_2225_6_19 | 19935 | 21506 | - | 3.A.1.128.3 |
| TC | HRGMv2_2225_6 | HRGMv2_2225_6_20 | 21510 | 22268 | - | 3.A.1.128.3 |
| pfam | HRGMv2_2225_6 | HRGMv2_2225_6_21 | 22487 | 23551 | - | TraX | TraX |
| TF | HRGMv2_2225_6 | HRGMv2_2225_6_22 | 23988 | 24683 | - | Trans_reg_C |
| TC | HRGMv2_2225_6 | HRGMv2_2225_6_23 | 25075 | 26343 | - | 2.A.86.1.9 |
Gene ID: HRGMv2_2225_6_18
Type: CAZyme
Location: 18730 - 19869 (-)
Type: CAZyme
Location: 18730 - 19869 (-)
Gene ID: HRGMv2_2225_6_19
Type: TC
Location: 19935 - 21506 (-)
Type: TC
Location: 19935 - 21506 (-)
Gene ID: HRGMv2_2225_6_20
Type: TC
Location: 21510 - 22268 (-)
Type: TC
Location: 21510 - 22268 (-)
Gene ID: HRGMv2_2225_6_21
Type: pfam
Location: 22487 - 23551 (-)
Type: pfam
Location: 22487 - 23551 (-)
Gene ID: HRGMv2_2225_6_22
Type: TF
Location: 23988 - 24683 (-)
Type: TF
Location: 23988 - 24683 (-)
Gene ID: HRGMv2_2225_6_23
Type: TC
Location: 25075 - 26343 (-)
Type: TC
Location: 25075 - 26343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.