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Cluster: HRGMv2_2225_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2225_6 HRGMv2_2225_6_6 3953 6976 - GH38
CAZyme HRGMv2_2225_6 HRGMv2_2225_6_7 6994 8616 - GH105
TC HRGMv2_2225_6 HRGMv2_2225_6_8 8629 9672 - 3.A.1.5.29
TC HRGMv2_2225_6 HRGMv2_2225_6_9 9665 10753 - 3.A.1.5.29
TC HRGMv2_2225_6 HRGMv2_2225_6_10 10771 11898 - 3.A.1.5.12
TC HRGMv2_2225_6 HRGMv2_2225_6_11 11902 12900 - 3.A.1.5.29
TC HRGMv2_2225_6 HRGMv2_2225_6_12 13057 15072 - 3.A.1.5.12
TF HRGMv2_2225_6 HRGMv2_2225_6_13 15371 16294 + HTH_AraC | HTH_AraC
TC HRGMv2_2225_6 HRGMv2_2225_6_14 16580 17155 + 2.A.107.1.2
Gene ID: HRGMv2_2225_6_6
Type: CAZyme
Location: 3953 - 6976 (-)
Gene ID: HRGMv2_2225_6_7
Type: CAZyme
Location: 6994 - 8616 (-)
Gene ID: HRGMv2_2225_6_8
Type: TC
Location: 8629 - 9672 (-)
Gene ID: HRGMv2_2225_6_9
Type: TC
Location: 9665 - 10753 (-)
Gene ID: HRGMv2_2225_6_10
Type: TC
Location: 10771 - 11898 (-)
Gene ID: HRGMv2_2225_6_11
Type: TC
Location: 11902 - 12900 (-)
Gene ID: HRGMv2_2225_6_12
Type: TC
Location: 13057 - 15072 (-)
Gene ID: HRGMv2_2225_6_13
Type: TF
Location: 15371 - 16294 (+)
Gene ID: HRGMv2_2225_6_14
Type: TC
Location: 16580 - 17155 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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