Cluster: HRGMv2_2225_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_03516
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_5 | HRGMv2_2225_5_51 | 56995 | 57696 | + | CE4 |
| TC | HRGMv2_2225_5 | HRGMv2_2225_5_52 | 57715 | 59517 | + | 3.A.1.111.2 |
| TC | HRGMv2_2225_5 | HRGMv2_2225_5_53 | 59510 | 61294 | + | 3.A.1.111.2 |
Gene ID: HRGMv2_2225_5_51
Type: CAZyme
Location: 56995 - 57696 (+)
Type: CAZyme
Location: 56995 - 57696 (+)
Gene ID: HRGMv2_2225_5_52
Type: TC
Location: 57715 - 59517 (+)
Type: TC
Location: 57715 - 59517 (+)
Gene ID: HRGMv2_2225_5_53
Type: TC
Location: 59510 - 61294 (+)
Type: TC
Location: 59510 - 61294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.