Cluster: HRGMv2_2225_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_03491
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_5 | HRGMv2_2225_5_42 | 43953 | 45284 | - | GH28 |
| TC | HRGMv2_2225_5 | HRGMv2_2225_5_43 | 45567 | 47657 | + | 1.B.52.2.1 |
| pfam | HRGMv2_2225_5 | HRGMv2_2225_5_44 | 47839 | 48561 | + | MatE |
| TC | HRGMv2_2225_5 | HRGMv2_2225_5_45 | 48634 | 49965 | + | 2.A.66.1.25 |
| CAZyme | HRGMv2_2225_5 | HRGMv2_2225_5_46 | 50060 | 52411 | + | GH31_3 |
Gene ID: HRGMv2_2225_5_42
Type: CAZyme
Location: 43953 - 45284 (-)
Type: CAZyme
Location: 43953 - 45284 (-)
Gene ID: HRGMv2_2225_5_43
Type: TC
Location: 45567 - 47657 (+)
Type: TC
Location: 45567 - 47657 (+)
Gene ID: HRGMv2_2225_5_44
Type: pfam
Location: 47839 - 48561 (+)
Type: pfam
Location: 47839 - 48561 (+)
Gene ID: HRGMv2_2225_5_45
Type: TC
Location: 48634 - 49965 (+)
Type: TC
Location: 48634 - 49965 (+)
Gene ID: HRGMv2_2225_5_46
Type: CAZyme
Location: 50060 - 52411 (+)
Type: CAZyme
Location: 50060 - 52411 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.