Cluster: HRGMv2_2225_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2225
- CGC Family ID: CGCFAM_09992
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2225_1 | HRGMv2_2225_1_47 | 45902 | 46705 | - | CE4 |
| peptidase | HRGMv2_2225_1 | HRGMv2_2225_1_48 | 46908 | 47939 | + | I87.UPW |
| peptidase | HRGMv2_2225_1 | HRGMv2_2225_1_49 | 47943 | 48812 | + | I87.UPW |
| TC | HRGMv2_2225_1 | HRGMv2_2225_1_50 | 48919 | 50670 | - | 1.A.11.2.7 |
Gene ID: HRGMv2_2225_1_47
Type: CAZyme
Location: 45902 - 46705 (-)
Type: CAZyme
Location: 45902 - 46705 (-)
Gene ID: HRGMv2_2225_1_48
Type: peptidase
Location: 46908 - 47939 (+)
Type: peptidase
Location: 46908 - 47939 (+)
Gene ID: HRGMv2_2225_1_49
Type: peptidase
Location: 47943 - 48812 (+)
Type: peptidase
Location: 47943 - 48812 (+)
Gene ID: HRGMv2_2225_1_50
Type: TC
Location: 48919 - 50670 (-)
Type: TC
Location: 48919 - 50670 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934402315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2225_1_49 | vegetarian > vegan | 1.38517 | 0.01315 |