dbCAN Logo

Cluster: HRGMv2_2215_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_57 57451 58803 - GH32
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_58 58822 60840 - GH36
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_59 60871 62574 - GH13_31
pfam HRGMv2_2215_4 HRGMv2_2215_4_60 62617 63771 - MFS_1 | MFS_1_like
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_61 63768 65456 - GH13_31
TC HRGMv2_2215_4 HRGMv2_2215_4_62 65582 66451 - 3.A.1.1.45
TC HRGMv2_2215_4 HRGMv2_2215_4_63 66451 67347 - 3.A.1.1.45
NULL(UNKNOWN) HRGMv2_2215_4 HRGMv2_2215_4_64 67433 68956 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2215_4 HRGMv2_2215_4_65 69255 70775 - S12.UPW
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_66 70804 72243 - GH13_18
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_67 72278 73306 - GH172
pfam HRGMv2_2215_4 HRGMv2_2215_4_68 73554 74120 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7
pfam HRGMv2_2215_4 HRGMv2_2215_4_69 74239 74739 + GreA_GreB | GreA_GreB_N
CAZyme HRGMv2_2215_4 HRGMv2_2215_4_70 74879 76207 - GH27
Gene ID: HRGMv2_2215_4_57
Type: CAZyme
Location: 57451 - 58803 (-)
Gene ID: HRGMv2_2215_4_58
Type: CAZyme
Location: 58822 - 60840 (-)
Gene ID: HRGMv2_2215_4_59
Type: CAZyme
Location: 60871 - 62574 (-)
Gene ID: HRGMv2_2215_4_60
Type: pfam
Location: 62617 - 63771 (-)
Gene ID: HRGMv2_2215_4_61
Type: CAZyme
Location: 63768 - 65456 (-)
Gene ID: HRGMv2_2215_4_62
Type: TC
Location: 65582 - 66451 (-)
Gene ID: HRGMv2_2215_4_63
Type: TC
Location: 66451 - 67347 (-)
Gene ID: HRGMv2_2215_4_64
Type:
Location: 67433 - 68956 (-)
Gene ID: HRGMv2_2215_4_65
Type: peptidase
Location: 69255 - 70775 (-)
Gene ID: HRGMv2_2215_4_66
Type: CAZyme
Location: 70804 - 72243 (-)
Gene ID: HRGMv2_2215_4_67
Type: CAZyme
Location: 72278 - 73306 (-)
Gene ID: HRGMv2_2215_4_68
Type: pfam
Location: 73554 - 74120 (-)
Gene ID: HRGMv2_2215_4_69
Type: pfam
Location: 74239 - 74739 (+)
Gene ID: HRGMv2_2215_4_70
Type: CAZyme
Location: 74879 - 76207 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List