Cluster: HRGMv2_2215_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00247
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_95 | HRGMv2_2215_95_1 | 3 | 1100 | - | GH13_4 |
| TF | HRGMv2_2215_95 | HRGMv2_2215_95_2 | 1097 | 2179 | - | LacI |
| CAZyme | HRGMv2_2215_95 | HRGMv2_2215_95_3 | 2248 | 3801 | - | GH32 |
| pfam | HRGMv2_2215_95 | HRGMv2_2215_95_4 | 3816 | 4610 | - | YdjC |
| CAZyme | HRGMv2_2215_95 | HRGMv2_2215_95_5 | 4733 | 6244 | - | GH32 |
| TC | HRGMv2_2215_95 | HRGMv2_2215_95_6 | 6366 | 7223 | - | 3.A.1.1.45 |
| TC | HRGMv2_2215_95 | HRGMv2_2215_95_7 | 7223 | 7885 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2215_95_1
Type: CAZyme
Location: 3 - 1100 (-)
Type: CAZyme
Location: 3 - 1100 (-)
Gene ID: HRGMv2_2215_95_2
Type: TF
Location: 1097 - 2179 (-)
Type: TF
Location: 1097 - 2179 (-)
Gene ID: HRGMv2_2215_95_3
Type: CAZyme
Location: 2248 - 3801 (-)
Type: CAZyme
Location: 2248 - 3801 (-)
Gene ID: HRGMv2_2215_95_4
Type: pfam
Location: 3816 - 4610 (-)
Type: pfam
Location: 3816 - 4610 (-)
Gene ID: HRGMv2_2215_95_5
Type: CAZyme
Location: 4733 - 6244 (-)
Type: CAZyme
Location: 4733 - 6244 (-)
Gene ID: HRGMv2_2215_95_6
Type: TC
Location: 6366 - 7223 (-)
Type: TC
Location: 6366 - 7223 (-)
Gene ID: HRGMv2_2215_95_7
Type: TC
Location: 7223 - 7885 (-)
Type: TC
Location: 7223 - 7885 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.