Cluster: HRGMv2_2215_CGC42
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_74 | HRGMv2_2215_74_1 | 81 | 2093 | - | GH42 |
| CAZyme | HRGMv2_2215_74 | HRGMv2_2215_74_2 | 2109 | 3590 | - | GH30_1 |
| CAZyme | HRGMv2_2215_74 | HRGMv2_2215_74_3 | 3590 | 4774 | - | GH5_44 |
| STP | HRGMv2_2215_74 | HRGMv2_2215_74_4 | 4917 | 6452 | - | SBP_bac_1 |
| TC | HRGMv2_2215_74 | HRGMv2_2215_74_5 | 6547 | 7476 | - | 3.A.1.1.29 |
| TC | HRGMv2_2215_74 | HRGMv2_2215_74_6 | 7494 | 8420 | - | 3.A.1.1.29 |
| TC | HRGMv2_2215_74 | HRGMv2_2215_74_7 | 8707 | 10572 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2215_74_1
Type: CAZyme
Location: 81 - 2093 (-)
Type: CAZyme
Location: 81 - 2093 (-)
Gene ID: HRGMv2_2215_74_2
Type: CAZyme
Location: 2109 - 3590 (-)
Type: CAZyme
Location: 2109 - 3590 (-)
Gene ID: HRGMv2_2215_74_3
Type: CAZyme
Location: 3590 - 4774 (-)
Type: CAZyme
Location: 3590 - 4774 (-)
Gene ID: HRGMv2_2215_74_4
Type: STP
Location: 4917 - 6452 (-)
Type: STP
Location: 4917 - 6452 (-)
Gene ID: HRGMv2_2215_74_5
Type: TC
Location: 6547 - 7476 (-)
Type: TC
Location: 6547 - 7476 (-)
Gene ID: HRGMv2_2215_74_6
Type: TC
Location: 7494 - 8420 (-)
Type: TC
Location: 7494 - 8420 (-)
Gene ID: HRGMv2_2215_74_7
Type: TC
Location: 8707 - 10572 (-)
Type: TC
Location: 8707 - 10572 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.