Cluster: HRGMv2_2215_CGC4
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_25 | 28505 | 29455 | - | GT11 |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_26 | 29548 | 30585 | - | GH105 |
| TC | HRGMv2_2215_2 | HRGMv2_2215_2_27 | 30588 | 32138 | - | 2.A.66.1.40 |
| pfam | HRGMv2_2215_2 | HRGMv2_2215_2_28 | 32125 | 33333 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_29 | 33326 | 34366 | - | GT2 |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_30 | 34381 | 35493 | - | GT2 |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_31 | 35490 | 36578 | - | GT4 |
| TC | HRGMv2_2215_2 | HRGMv2_2215_2_32 | 36578 | 37981 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_2215_2 | HRGMv2_2215_2_33 | 37993 | 39123 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_34 | 39150 | 41225 | - | GT11 | GT2 |
| peptidase | HRGMv2_2215_2 | HRGMv2_2215_2_35 | 41247 | 43163 | - | C44.001 |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_36 | 43167 | 44525 | - | GT4 |
| pfam | HRGMv2_2215_2 | HRGMv2_2215_2_37 | 44527 | 45258 | - | DUF2334 |
| pfam | HRGMv2_2215_2 | HRGMv2_2215_2_38 | 45269 | 46243 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_39 | 46341 | 47381 | - | GT113 |
| pfam | HRGMv2_2215_2 | HRGMv2_2215_2_40 | 47323 | 47874 | - | Hexapep |
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_41 | 47858 | 48991 | - | GT4 |
Gene ID: HRGMv2_2215_2_25
Type: CAZyme
Location: 28505 - 29455 (-)
Type: CAZyme
Location: 28505 - 29455 (-)
Gene ID: HRGMv2_2215_2_26
Type: CAZyme
Location: 29548 - 30585 (-)
Type: CAZyme
Location: 29548 - 30585 (-)
Gene ID: HRGMv2_2215_2_27
Type: TC
Location: 30588 - 32138 (-)
Type: TC
Location: 30588 - 32138 (-)
Gene ID: HRGMv2_2215_2_28
Type: pfam
Location: 32125 - 33333 (-)
Type: pfam
Location: 32125 - 33333 (-)
Gene ID: HRGMv2_2215_2_29
Type: CAZyme
Location: 33326 - 34366 (-)
Type: CAZyme
Location: 33326 - 34366 (-)
Gene ID: HRGMv2_2215_2_30
Type: CAZyme
Location: 34381 - 35493 (-)
Type: CAZyme
Location: 34381 - 35493 (-)
Gene ID: HRGMv2_2215_2_31
Type: CAZyme
Location: 35490 - 36578 (-)
Type: CAZyme
Location: 35490 - 36578 (-)
Gene ID: HRGMv2_2215_2_32
Type: TC
Location: 36578 - 37981 (-)
Type: TC
Location: 36578 - 37981 (-)
Gene ID: HRGMv2_2215_2_33
Type:
Location: 37993 - 39123 (-)
Type:
Location: 37993 - 39123 (-)
Gene ID: HRGMv2_2215_2_34
Type: CAZyme
Location: 39150 - 41225 (-)
Type: CAZyme
Location: 39150 - 41225 (-)
Gene ID: HRGMv2_2215_2_35
Type: peptidase
Location: 41247 - 43163 (-)
Type: peptidase
Location: 41247 - 43163 (-)
Gene ID: HRGMv2_2215_2_36
Type: CAZyme
Location: 43167 - 44525 (-)
Type: CAZyme
Location: 43167 - 44525 (-)
Gene ID: HRGMv2_2215_2_37
Type: pfam
Location: 44527 - 45258 (-)
Type: pfam
Location: 44527 - 45258 (-)
Gene ID: HRGMv2_2215_2_38
Type: pfam
Location: 45269 - 46243 (-)
Type: pfam
Location: 45269 - 46243 (-)
Gene ID: HRGMv2_2215_2_39
Type: CAZyme
Location: 46341 - 47381 (-)
Type: CAZyme
Location: 46341 - 47381 (-)
Gene ID: HRGMv2_2215_2_40
Type: pfam
Location: 47323 - 47874 (-)
Type: pfam
Location: 47323 - 47874 (-)
Gene ID: HRGMv2_2215_2_41
Type: CAZyme
Location: 47858 - 48991 (-)
Type: CAZyme
Location: 47858 - 48991 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.