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Cluster: HRGMv2_2215_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2215_39 HRGMv2_2215_39_11 9690 11309 + 8.A.7.1.1
sulfatase HRGMv2_2215_39 HRGMv2_2215_39_12 11395 12120 + S1_9
CAZyme HRGMv2_2215_39 HRGMv2_2215_39_13 12132 13262 + CE9
TC HRGMv2_2215_39 HRGMv2_2215_39_14 13256 13735 + 4.A.1.2.11
TC HRGMv2_2215_39 HRGMv2_2215_39_15 13810 15279 + 4.A.1.1.7
TC HRGMv2_2215_39 HRGMv2_2215_39_16 15528 16874 + 2.A.66.1.33
CAZyme HRGMv2_2215_39 HRGMv2_2215_39_17 17023 18168 + CE15
TC HRGMv2_2215_39 HRGMv2_2215_39_18 18126 19409 + 2.A.1.65.8
CAZyme HRGMv2_2215_39 HRGMv2_2215_39_19 19659 21218 + GH31_3
Gene ID: HRGMv2_2215_39_11
Type: TC
Location: 9690 - 11309 (+)
Gene ID: HRGMv2_2215_39_12
Type: sulfatase
Location: 11395 - 12120 (+)
Gene ID: HRGMv2_2215_39_13
Type: CAZyme
Location: 12132 - 13262 (+)
Gene ID: HRGMv2_2215_39_14
Type: TC
Location: 13256 - 13735 (+)
Gene ID: HRGMv2_2215_39_15
Type: TC
Location: 13810 - 15279 (+)
Gene ID: HRGMv2_2215_39_16
Type: TC
Location: 15528 - 16874 (+)
Gene ID: HRGMv2_2215_39_17
Type: CAZyme
Location: 17023 - 18168 (+)
Gene ID: HRGMv2_2215_39_18
Type: TC
Location: 18126 - 19409 (+)
Gene ID: HRGMv2_2215_39_19
Type: CAZyme
Location: 19659 - 21218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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