Cluster: HRGMv2_2215_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00410
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_31 | HRGMv2_2215_31_11 | 10799 | 13378 | - | GH3 |
| CAZyme | HRGMv2_2215_31 | HRGMv2_2215_31_12 | 13393 | 15873 | - | GH2 |
| CAZyme | HRGMv2_2215_31 | HRGMv2_2215_31_13 | 15896 | 17923 | - | GH120 |
| TC | HRGMv2_2215_31 | HRGMv2_2215_31_14 | 18016 | 19407 | - | 2.A.2.3.3 |
| TF | HRGMv2_2215_31 | HRGMv2_2215_31_15 | 19520 | 20614 | - | LacI |
| TC | HRGMv2_2215_31 | HRGMv2_2215_31_16 | 20905 | 22266 | - | 2.A.25.1.3 |
Gene ID: HRGMv2_2215_31_11
Type: CAZyme
Location: 10799 - 13378 (-)
Type: CAZyme
Location: 10799 - 13378 (-)
Gene ID: HRGMv2_2215_31_12
Type: CAZyme
Location: 13393 - 15873 (-)
Type: CAZyme
Location: 13393 - 15873 (-)
Gene ID: HRGMv2_2215_31_13
Type: CAZyme
Location: 15896 - 17923 (-)
Type: CAZyme
Location: 15896 - 17923 (-)
Gene ID: HRGMv2_2215_31_14
Type: TC
Location: 18016 - 19407 (-)
Type: TC
Location: 18016 - 19407 (-)
Gene ID: HRGMv2_2215_31_15
Type: TF
Location: 19520 - 20614 (-)
Type: TF
Location: 19520 - 20614 (-)
Gene ID: HRGMv2_2215_31_16
Type: TC
Location: 20905 - 22266 (-)
Type: TC
Location: 20905 - 22266 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.