Cluster: HRGMv2_2215_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_30 | HRGMv2_2215_30_2 | 1746 | 2912 | - | GT4 |
| pfam | HRGMv2_2215_30 | HRGMv2_2215_30_3 | 2992 | 4167 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_2215_30 | HRGMv2_2215_30_4 | 4255 | 5739 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_2215_30 | HRGMv2_2215_30_5 | 5816 | 7279 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2215_30 | HRGMv2_2215_30_6 | 7267 | 8124 | - | 3.A.1.103.5 |
Gene ID: HRGMv2_2215_30_2
Type: CAZyme
Location: 1746 - 2912 (-)
Type: CAZyme
Location: 1746 - 2912 (-)
Gene ID: HRGMv2_2215_30_3
Type: pfam
Location: 2992 - 4167 (-)
Type: pfam
Location: 2992 - 4167 (-)
Gene ID: HRGMv2_2215_30_4
Type: TC
Location: 4255 - 5739 (+)
Type: TC
Location: 4255 - 5739 (+)
Gene ID: HRGMv2_2215_30_5
Type:
Location: 5816 - 7279 (+)
Type:
Location: 5816 - 7279 (+)
Gene ID: HRGMv2_2215_30_6
Type: TC
Location: 7267 - 8124 (-)
Type: TC
Location: 7267 - 8124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.