Cluster: HRGMv2_2215_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_01669
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_2 | HRGMv2_2215_2_16 | 17808 | 18908 | - | GH5_13 |
| TC | HRGMv2_2215_2 | HRGMv2_2215_2_17 | 19002 | 19838 | - | 3.A.1.1.28 |
| TC | HRGMv2_2215_2 | HRGMv2_2215_2_18 | 19835 | 20740 | - | 3.A.1.1.20 |
| STP | HRGMv2_2215_2 | HRGMv2_2215_2_19 | 20787 | 22151 | - | SBP_bac_1 |
| TF | HRGMv2_2215_2 | HRGMv2_2215_2_20 | 22336 | 23928 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2215_2 | HRGMv2_2215_2_21 | 23956 | 25761 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2215_2_16
Type: CAZyme
Location: 17808 - 18908 (-)
Type: CAZyme
Location: 17808 - 18908 (-)
Gene ID: HRGMv2_2215_2_17
Type: TC
Location: 19002 - 19838 (-)
Type: TC
Location: 19002 - 19838 (-)
Gene ID: HRGMv2_2215_2_18
Type: TC
Location: 19835 - 20740 (-)
Type: TC
Location: 19835 - 20740 (-)
Gene ID: HRGMv2_2215_2_19
Type: STP
Location: 20787 - 22151 (-)
Type: STP
Location: 20787 - 22151 (-)
Gene ID: HRGMv2_2215_2_20
Type: TF
Location: 22336 - 23928 (-)
Type: TF
Location: 22336 - 23928 (-)
Gene ID: HRGMv2_2215_2_21
Type: TC
Location: 23956 - 25761 (-)
Type: TC
Location: 23956 - 25761 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.