Cluster: HRGMv2_2215_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00140
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2215_28 | HRGMv2_2215_28_4 | 5067 | 7118 | + | CBM48 | GH13_9 |
| TF | HRGMv2_2215_28 | HRGMv2_2215_28_5 | 7139 | 7519 | + | Fe_dep_repress |
| TC | HRGMv2_2215_28 | HRGMv2_2215_28_6 | 7527 | 8540 | + | 9.B.18.2.1 |
| pfam | HRGMv2_2215_28 | HRGMv2_2215_28_7 | 8556 | 9758 | + | DegT_DnrJ_EryC1 |
| CAZyme | HRGMv2_2215_28 | HRGMv2_2215_28_8 | 9772 | 10989 | + | GT2 |
Gene ID: HRGMv2_2215_28_4
Type: CAZyme
Location: 5067 - 7118 (+)
Type: CAZyme
Location: 5067 - 7118 (+)
Gene ID: HRGMv2_2215_28_5
Type: TF
Location: 7139 - 7519 (+)
Type: TF
Location: 7139 - 7519 (+)
Gene ID: HRGMv2_2215_28_6
Type: TC
Location: 7527 - 8540 (+)
Type: TC
Location: 7527 - 8540 (+)
Gene ID: HRGMv2_2215_28_7
Type: pfam
Location: 8556 - 9758 (+)
Type: pfam
Location: 8556 - 9758 (+)
Gene ID: HRGMv2_2215_28_8
Type: CAZyme
Location: 9772 - 10989 (+)
Type: CAZyme
Location: 9772 - 10989 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.