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Cluster: HRGMv2_2215_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2215_18 HRGMv2_2215_18_9 8627 10138 + 3.A.1.2.3
TC HRGMv2_2215_18 HRGMv2_2215_18_10 10154 11806 + 3.A.1.2.3
TF HRGMv2_2215_18 HRGMv2_2215_18_11 12005 13609 + HTH_AraC | HTH_AraC
TC HRGMv2_2215_18 HRGMv2_2215_18_12 13699 15486 + 8.A.59.2.1
STP HRGMv2_2215_18 HRGMv2_2215_18_13 15473 16447 + Peripla_BP_1
TC HRGMv2_2215_18 HRGMv2_2215_18_14 16520 17587 + 3.A.1.2.3
CAZyme HRGMv2_2215_18 HRGMv2_2215_18_15 17624 18262 + CE4
TC HRGMv2_2215_18 HRGMv2_2215_18_16 18308 19684 - 2.A.66.1.13
TC HRGMv2_2215_18 HRGMv2_2215_18_17 19827 21203 + 2.A.25.1.5
Gene ID: HRGMv2_2215_18_9
Type: TC
Location: 8627 - 10138 (+)
Gene ID: HRGMv2_2215_18_10
Type: TC
Location: 10154 - 11806 (+)
Gene ID: HRGMv2_2215_18_11
Type: TF
Location: 12005 - 13609 (+)
Gene ID: HRGMv2_2215_18_12
Type: TC
Location: 13699 - 15486 (+)
Gene ID: HRGMv2_2215_18_13
Type: STP
Location: 15473 - 16447 (+)
Gene ID: HRGMv2_2215_18_14
Type: TC
Location: 16520 - 17587 (+)
Gene ID: HRGMv2_2215_18_15
Type: CAZyme
Location: 17624 - 18262 (+)
Gene ID: HRGMv2_2215_18_16
Type: TC
Location: 18308 - 19684 (-)
Gene ID: HRGMv2_2215_18_17
Type: TC
Location: 19827 - 21203 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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