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Cluster: HRGMv2_2215_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2215_16 HRGMv2_2215_16_14 19179 20117 - 3.A.1.5.25
TC HRGMv2_2215_16 HRGMv2_2215_16_15 20110 21264 - 3.A.1.5.25
TC HRGMv2_2215_16 HRGMv2_2215_16_16 21281 22312 - 3.A.1.5.2
TC HRGMv2_2215_16 HRGMv2_2215_16_17 22309 23262 - 3.A.1.5.19
TC HRGMv2_2215_16 HRGMv2_2215_16_18 23493 25436 - 3.A.1.5.1
peptidase HRGMv2_2215_16 HRGMv2_2215_16_19 25732 26868 + M19.UPW
pfam HRGMv2_2215_16 HRGMv2_2215_16_20 26894 28315 + Transglut_core
TC HRGMv2_2215_16 HRGMv2_2215_16_21 28509 30254 - 3.A.1.106.2
CAZyme HRGMv2_2215_16 HRGMv2_2215_16_22 30337 32451 - GH8
Gene ID: HRGMv2_2215_16_14
Type: TC
Location: 19179 - 20117 (-)
Gene ID: HRGMv2_2215_16_15
Type: TC
Location: 20110 - 21264 (-)
Gene ID: HRGMv2_2215_16_16
Type: TC
Location: 21281 - 22312 (-)
Gene ID: HRGMv2_2215_16_17
Type: TC
Location: 22309 - 23262 (-)
Gene ID: HRGMv2_2215_16_18
Type: TC
Location: 23493 - 25436 (-)
Gene ID: HRGMv2_2215_16_19
Type: peptidase
Location: 25732 - 26868 (+)
Gene ID: HRGMv2_2215_16_20
Type: pfam
Location: 26894 - 28315 (+)
Gene ID: HRGMv2_2215_16_21
Type: TC
Location: 28509 - 30254 (-)
Gene ID: HRGMv2_2215_16_22
Type: CAZyme
Location: 30337 - 32451 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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