Cluster: HRGMv2_2215_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2215
- CGC Family ID: CGCFAM_00088
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2215_9 | HRGMv2_2215_9_1 | 296 | 946 | - | 1.A.62.2.2 |
| pfam | HRGMv2_2215_9 | HRGMv2_2215_9_2 | 943 | 1869 | - | Lactamase_B |
| TC | HRGMv2_2215_9 | HRGMv2_2215_9_3 | 2198 | 3652 | + | 3.A.1.1.45 |
| TC | HRGMv2_2215_9 | HRGMv2_2215_9_4 | 3799 | 4656 | + | 3.A.1.1.45 |
| TC | HRGMv2_2215_9 | HRGMv2_2215_9_5 | 4656 | 5594 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2215_9 | HRGMv2_2215_9_6 | 5701 | 7227 | + | GH77 |
Gene ID: HRGMv2_2215_9_1
Type: TC
Location: 296 - 946 (-)
Type: TC
Location: 296 - 946 (-)
Gene ID: HRGMv2_2215_9_2
Type: pfam
Location: 943 - 1869 (-)
Type: pfam
Location: 943 - 1869 (-)
Gene ID: HRGMv2_2215_9_3
Type: TC
Location: 2198 - 3652 (+)
Type: TC
Location: 2198 - 3652 (+)
Gene ID: HRGMv2_2215_9_4
Type: TC
Location: 3799 - 4656 (+)
Type: TC
Location: 3799 - 4656 (+)
Gene ID: HRGMv2_2215_9_5
Type: TC
Location: 4656 - 5594 (+)
Type: TC
Location: 4656 - 5594 (+)
Gene ID: HRGMv2_2215_9_6
Type: CAZyme
Location: 5701 - 7227 (+)
Type: CAZyme
Location: 5701 - 7227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.