Cluster: HRGMv2_2215_CGC1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2215_1 | HRGMv2_2215_1_59 | 59832 | 61235 | + | 3.A.1.1.27 |
| TC | HRGMv2_2215_1 | HRGMv2_2215_1_60 | 61235 | 62116 | + | 3.A.1.1.27 |
| TF | HRGMv2_2215_1 | HRGMv2_2215_1_61 | 62123 | 63118 | + | LacI |
| CAZyme | HRGMv2_2215_1 | HRGMv2_2215_1_62 | 63182 | 65332 | + | GH35 |
| pfam | HRGMv2_2215_1 | HRGMv2_2215_1_63 | 65461 | 66714 | + | GlcNAc_2-epim |
| NULL(UNKNOWN) | HRGMv2_2215_1 | HRGMv2_2215_1_64 | 67052 | 68344 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2215_1 | HRGMv2_2215_1_65 | 68468 | 69076 | + | 2.A.107.1.2 |
| TC | HRGMv2_2215_1 | HRGMv2_2215_1_66 | 69098 | 70246 | + | 3.A.1.1.38 |
| TC | HRGMv2_2215_1 | HRGMv2_2215_1_67 | 70243 | 71139 | + | 3.A.1.1.3 |
| TC | HRGMv2_2215_1 | HRGMv2_2215_1_68 | 71136 | 72002 | + | 3.A.1.1.20 |
Gene ID: HRGMv2_2215_1_59
Type: TC
Location: 59832 - 61235 (+)
Type: TC
Location: 59832 - 61235 (+)
Gene ID: HRGMv2_2215_1_60
Type: TC
Location: 61235 - 62116 (+)
Type: TC
Location: 61235 - 62116 (+)
Gene ID: HRGMv2_2215_1_61
Type: TF
Location: 62123 - 63118 (+)
Type: TF
Location: 62123 - 63118 (+)
Gene ID: HRGMv2_2215_1_62
Type: CAZyme
Location: 63182 - 65332 (+)
Type: CAZyme
Location: 63182 - 65332 (+)
Gene ID: HRGMv2_2215_1_63
Type: pfam
Location: 65461 - 66714 (+)
Type: pfam
Location: 65461 - 66714 (+)
Gene ID: HRGMv2_2215_1_64
Type:
Location: 67052 - 68344 (+)
Type:
Location: 67052 - 68344 (+)
Gene ID: HRGMv2_2215_1_65
Type: TC
Location: 68468 - 69076 (+)
Type: TC
Location: 68468 - 69076 (+)
Gene ID: HRGMv2_2215_1_66
Type: TC
Location: 69098 - 70246 (+)
Type: TC
Location: 69098 - 70246 (+)
Gene ID: HRGMv2_2215_1_67
Type: TC
Location: 70243 - 71139 (+)
Type: TC
Location: 70243 - 71139 (+)
Gene ID: HRGMv2_2215_1_68
Type: TC
Location: 71136 - 72002 (+)
Type: TC
Location: 71136 - 72002 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-791
Species
CAG-791 sp000431495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.